Structure of PDB 1h6m Chain A

Receptor sequence
>1h6mA (length=129) Species: 9031 (Gallus gallus) [Search protein sequence]
KVFGRCELAAAMKRHGLDNYRGYSLGNWVCAAKFQSNFNTQATNRNTDGS
TDYGILQINSRWWCNDGRTPGSRNLCNIPCSALLSSDITASVNCAKKIVS
DGNGMNAWVAWRNRCKGTDVQAWIRGCRL
3D structure
PDB1h6m Catalysis by Hen Egg-White Lysozyme Proceeds Via a Covalent Intermediate
ChainA
Resolution1.64 Å
3D
structure
Catalytic site residues are labeled in the structure
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Enzymatic activity
Catalytic site (original residue number in PDB) Q35 N46 D48 S50 D52 N59
Catalytic site (residue number reindexed from 1) Q35 N46 D48 S50 D52 N59
Enzyme Commision number 3.2.1.17: lysozyme.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 G2F A N46 D52 Q57 N59 W108 V109 N46 D52 Q57 N59 W108 V109
Gene Ontology
Molecular Function
GO:0003796 lysozyme activity
GO:0005515 protein binding
GO:0016231 beta-N-acetylglucosaminidase activity
GO:0016798 hydrolase activity, acting on glycosyl bonds
GO:0042802 identical protein binding
Biological Process
GO:0016998 cell wall macromolecule catabolic process
GO:0031640 killing of cells of another organism
GO:0042742 defense response to bacterium
GO:0050829 defense response to Gram-negative bacterium
GO:0050830 defense response to Gram-positive bacterium
Cellular Component
GO:0005576 extracellular region
GO:0005615 extracellular space
GO:0005737 cytoplasm
GO:0005783 endoplasmic reticulum

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Molecular Function
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Cellular Component
External links
PDB RCSB:1h6m, PDBe:1h6m, PDBj:1h6m
PDBsum1h6m
PubMed11518970
UniProtP00698|LYSC_CHICK Lysozyme C (Gene Name=LYZ)

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