Structure of PDB 1g8s Chain A

Receptor sequence
>1g8sA (length=230) Species: 2190 (Methanocaldococcus jannaschii) [Search protein sequence]
MEDIKIKEIFENIYEVDLGDGLKRIATKSIVKGKKVYDEKIIKIGDEEYR
IWNPNKSKLAAAIIKGLKVMPIKRDSKILYLGASAGTTPSHVADIADKGI
VYAIEYAPRIMRELLDACAERENIIPILGDANKPQEYANIVEKVDVIYED
VAQPNQAEILIKNAKWFLKKGGYGMIAIKARSIDVTKDPKEIFKEQKEIL
EAGGFKIVDEVDIEPFEKDHVMFVGIWEGK
3D structure
PDB1g8s Crystal structure of a fibrillarin homologue from Methanococcus jannaschii, a hyperthermophile, at 1.6 angstroms resolution
ChainA
Resolution1.6 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number 2.1.1.-
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 MET A S84 A85 T87 T88 S84 A85 T87 T88
Gene Ontology
Molecular Function
GO:0003723 RNA binding
GO:0008168 methyltransferase activity
GO:0008649 rRNA methyltransferase activity
GO:0016740 transferase activity
GO:1990259 histone H2AQ104 methyltransferase activity
Biological Process
GO:0000494 box C/D sno(s)RNA 3'-end processing
GO:0006338 chromatin remodeling
GO:0006364 rRNA processing
GO:0008033 tRNA processing
GO:0031167 rRNA methylation
GO:0032259 methylation
Cellular Component
GO:0031428 box C/D methylation guide snoRNP complex

View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:1g8s, PDBe:1g8s, PDBj:1g8s
PDBsum1g8s
PubMed
UniProtQ58108|FLPA_METJA Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase (Gene Name=flpA)

[Back to BioLiP]