Structure of PDB 1eom Chain A

Receptor sequence
>1eomA (length=283) Species: 238 (Elizabethkingia meningoseptica) [Search protein sequence]
NGVCIAYYITDGRNPTFKLKDIPDKVDMVILFGLKYWSLQDTTKLPGGTG
MMGSFKSYKDLDTQIRSLQSRGIKVLQNIDDDVSWQSSKPGGFASAAAYG
DAIKSIVIDKWKLDGISLDIEHSGAKPNPIPTFPGYAATGYNGWYSGSMA
ATPAFLNVISELTKYFGTTAPNNKQLQIASGIDVYAWNKIMENFRNNFNY
IQLQSYGANVSRTQLMMNYATGTNKIPASKMVFGAYAEGGTNQANDVEVA
KWTPTQGAKGGMMIYTYNSNVSYANAVRDAVKN
3D structure
PDB1eom Structural basis for the substrate specificity of endo-beta-N-acetylglucosaminidase F(3).
ChainA
Resolution2.1 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 3.2.1.96: mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 MAN A E245 Y272 E238 Y265
BS02 MAN A F39 G40 K42 D87 H129 F32 G33 K35 D80 H122
Gene Ontology
Molecular Function
GO:0016798 hydrolase activity, acting on glycosyl bonds
GO:0033925 mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity
Biological Process
GO:0005975 carbohydrate metabolic process
Cellular Component
GO:0005576 extracellular region

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:1eom, PDBe:1eom, PDBj:1eom
PDBsum1eom
PubMed10891067
UniProtP36913|EBA3_ELIME Endo-beta-N-acetylglucosaminidase F3 (Gene Name=endOF3)

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