Structure of PDB 1efr Chain A

Receptor sequence
>1efrA (length=487) Species: 9913 (Bos taurus) [Search protein sequence]
DLEETGRVLSIGDGIARVHGLRNVQAEEMVEFSSGLKGMSLNLEPDNVGV
VVFGNDKLIKEGDIVKRTGAIVDVPVGEELLGRVVDALGNAIDGKGPIGS
KARRRVGLKAPGIIPRISVREPMQTGIKAVDSLVPIGRGQRELIIGDRQT
GKTSIAIDTIINQKRFNDGTDEKKKLYCIYVAIGQKRSTVAQLVKRLTDA
DAMKYTIVVSATASDAAPLQYLAPYSGCSMGEYFRDNGKHALIIYDDLSK
QAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNDAFGGGSLTA
LPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSR
VGSAAQTRAMKQVAGTMKLELAQYREVAAFAQFGSDLDAATQQLLSRGVR
LTELLKQGQYSPMAIEEQVAVIYAGVRGYLDKLEPSKITKFENAFLSHVI
SQHQALLGKIRTDGKISEESDAKLKEIVTNFLAGFEA
3D structure
PDB1efr The Structure of Bovine F1-ATPase Complexed with the Peptide Antibiotic Efrapeptin.
ChainA
Resolution3.1 Å
3D
structure
Catalytic site residues are labeled in the structure
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Enzymatic activity
Catalytic site (original residue number in PDB) K175 Q208 K209 R373
Catalytic site (residue number reindexed from 1) K152 Q185 K186 R350
Enzyme Commision number 3.6.1.34: Transferred entry: 7.1.2.2.
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 peptide A G332 D333 V334 F351 L369 G309 D310 V311 F328 L346
BS02 ANP A R171 Q172 T173 G174 K175 S177 F357 R362 Q430 Q432 R148 Q149 T150 G151 K152 S154 F334 R339 Q407 Q409
Gene Ontology
Molecular Function
GO:0005515 protein binding
GO:0005524 ATP binding
GO:0032559 adenyl ribonucleotide binding
GO:0043531 ADP binding
GO:0046933 proton-transporting ATP synthase activity, rotational mechanism
Biological Process
GO:0006754 ATP biosynthetic process
GO:0015986 proton motive force-driven ATP synthesis
GO:0046034 ATP metabolic process
GO:1902600 proton transmembrane transport
Cellular Component
GO:0005737 cytoplasm
GO:0005739 mitochondrion
GO:0005743 mitochondrial inner membrane
GO:0005886 plasma membrane
GO:0045259 proton-transporting ATP synthase complex
GO:0045261 proton-transporting ATP synthase complex, catalytic core F(1)
GO:0045267 proton-transporting ATP synthase, catalytic core

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Molecular Function

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Biological Process

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Cellular Component
External links
PDB RCSB:1efr, PDBe:1efr, PDBj:1efr
PDBsum1efr
PubMed8790345
UniProtP19483|ATPA_BOVIN ATP synthase subunit alpha, mitochondrial (Gene Name=ATP5F1A)

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