Structure of PDB 1dvh Chain A

Receptor sequence
>1dvhA (length=79) Species: 881 (Nitratidesulfovibrio vulgaris) [Search protein sequence]
ADGAALYKSCIGCHGADGSKAAMGSAKPVKGQGAEELYKKMKGYADGSYG
GERKAMMTNAVKKYSDEELKALADYMSKL
3D structure
PDB1dvh Structure and dynamics of ferrocytochrome c553 from Desulfovibrio vulgaris studied by NMR spectroscopy and restrained molecular dynamics.
ChainA
ResolutionN/A
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 HEC A Y7 C10 C13 H14 A22 M23 A26 K27 V29 Q32 Y49 G51 E52 M57 Y64 M76 Y7 C10 C13 H14 A22 M23 A26 K27 V29 Q32 Y49 G51 E52 M57 Y64 M76
Gene Ontology
Molecular Function
GO:0009055 electron transfer activity
GO:0020037 heme binding
GO:0046872 metal ion binding
Cellular Component
GO:0042597 periplasmic space

View graph for
Molecular Function

View graph for
Cellular Component
External links
PDB RCSB:1dvh, PDBe:1dvh, PDBj:1dvh
PDBsum1dvh
PubMed7844834
UniProtP04032|CY553_NITV2 Cytochrome c-553 (Gene Name=cyf)

[Back to BioLiP]