Structure of PDB 1dot Chain A

Receptor sequence
>1dotA (length=686) Species: 8839 (Anas platyrhynchos) [Search protein sequence]
APPKTTVRWCTISSAEEKKCNSLKDHMQQERVTLSCVQKATYLDCIKAIS
NNEADAISLDGGQVFEAGLAPYKLKPIAAEVYERSGGSTTSYYAVAVVKK
GTDFMIKDLRGKTSCHTGLGRSAGWNIPIGTLIHREDIEWEGIESGISEQ
AVAKFFSASCVPGATIEQKLCRQCKGDAKTKCLRNGPYSGYSGAFQCLKD
GKGDVAFVKHTTVQENAPEEKDEYELLCLDGSRQPVDSYKTCNWARVAAH
AVVARDDSKIDDIWSFLGMQAYSLGVDTTSDFHLFGPPGKKDPVLKDLLF
KDSAIMLKRVPELMDSQLYLGFEYYSAIQSLRKDQLTVGPRENKIQWCAV
GKDEKSKCDRWSVVSNGEVECTILDDNKDCIVKITKGEADAISLDGGFVY
TAGVCGLVPVVGESYEDETQCSKDEEQPAYYFAVAVVKKSSAITWNNLQG
KKSCHTAVGRTAGWNIPMGLIHNKTGSCDFDDYFSEGCAPGSPPNSRLCK
LCQGSGENLLEKCVASSHEKYYGYTGALRCLVEQGDVAFIKHSTVGENVS
GSNKDDWAKGLTRDDFELLCTNGKRAKTMDYKTCHLAKVPTHAVVARPEK
ANKIRELLEGQEKLFGLHGTEKERFMMFQSQTKDLLFKALTKCLVKLRQG
ITYKEFLGDEYYASVASLNTCNPSDLLQVCTFLEDK
3D structure
PDB1dot Structure of diferric duck ovotransferrin at 2.35 A resolution.
ChainA
Resolution2.35 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 FE A D60 Y92 Y191 H250 D60 Y92 Y191 H250
BS02 FE A D395 Y431 Y524 H592 D395 Y431 Y524 H592
BS03 CO3 A D60 Y92 T117 R121 Y191 D60 Y92 T117 R121 Y191
BS04 CO3 A D395 T456 R460 T461 A462 G463 Y524 D395 T456 R460 T461 A462 G463 Y524
Gene Ontology
Molecular Function
GO:0046872 metal ion binding
Biological Process
GO:0006826 iron ion transport
GO:0019731 antibacterial humoral response
Cellular Component
GO:0005576 extracellular region
GO:0005615 extracellular space
GO:0005769 early endosome
GO:0005886 plasma membrane
GO:0055037 recycling endosome

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:1dot, PDBe:1dot, PDBj:1dot
PDBsum1dot
PubMed15299626
UniProtP56410|TRFE_ANAPL Ovotransferrin

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