Structure of PDB 1ddh Chain A

Receptor sequence
>1ddhA (length=274) Species: 10090 (Mus musculus) [Search protein sequence]
MSHSLRYFVTAVSRPGFGEPRYMEVGYVDNTEFVRFDSDAENPRYEPRAR
WIEQEGPEYWERETRRANGNEQSFRVDLRTALRYYNQSAGGSHTLQWMAG
CDVESDGRLLRGYWQFAYDGCDYIALNEDLKTWTAADMAAQITRRKWEQA
GAAERDRAYLEGECVEWLRRYLKNGNATLLATDPPKAHVTHHRRPEGDVT
LRCWALGFYPAEITLTWQLNGEELTQEMELVETRPAGDGTFQKWASVVVP
LGKQQKYTCHVEHEGLPEPLTLRW
3D structure
PDB1ddh Three-dimensional structure of H-2Dd complexed with an immunodominant peptide from human immunodeficiency virus envelope glycoprotein 120.
ChainA
Resolution3.1 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 peptide A Y7 R62 E63 R66 N70 S73 D77 Y84 W97 W114 F116 Y123 T143 K146 W147 R155 Y159 E163 W167 Y171 Y7 R62 E63 R66 N70 S73 D77 Y84 W97 W114 F116 Y123 T143 K146 W147 R155 Y159 E163 W167 Y171
External links
PDB RCSB:1ddh, PDBe:1ddh, PDBj:1ddh
PDBsum1ddh
PubMed9761682
UniProtP01900|HA12_MOUSE H-2 class I histocompatibility antigen, D-D alpha chain (Gene Name=H2-D1)

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