Structure of PDB 1dbo Chain A

Receptor sequence
>1dboA (length=481) Species: 984 (Pedobacter heparinus) [Search protein sequence]
QVVASNETLYQVVKEVKPGGLVQIADGTYKDVQLIVSNSGKSGLPITIKA
LNPGKVFFTGDAKVELRGEHLILEGIWFKDGNRAIQAWKSHGPGLVAIYG
SYNRITACVFDCFDEANSAYITTSLTEDGKVPQHCRIDHCSFTDKITFDQ
VINLNNTARAIKDGSVGGPGMYHRVDHCFFSNPQKPGNAGGGIRIGYYRN
DIGRCLVDSNLFMRQDSEAEIITSKSQENVYYGNTYLNCQGTMNFRHGDH
QVAINNFYIGNDQRFGYGGMFVWGSRHVIACNYFELSETIKSRGNAALYL
NPGAMASEHALAFDMLIANNAFINVNGYAIHFNPLDERRKEYCAANRLKF
ETPHQLMLKGNLFFKDKPYVYPFFKDDYFIAGKNSWTGNVALGVEKGIPV
NISANRSAYKPVKIKDIQPIEGIALDLNALISKGITGKPLSWDEVRPYWL
KEMPGTYALTARLSADRAAKFKAVIKRNKEH
3D structure
PDB1dbo Crystal structure of chondroitinase B from Flavobacterium heparinum and its complex with a disaccharide product at 1.7 A resolution.
ChainA
Resolution1.7 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 4.2.2.19: chondroitin B lyase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 MAN A H202 D233 S234 H177 D208 S209
BS02 ASG A N213 E245 R271 H334 R364 N188 E220 R246 H309 R339
BS03 GC4 A N213 R318 R363 N188 R293 R338
External links
PDB RCSB:1dbo, PDBe:1dbo, PDBj:1dbo
PDBsum1dbo
PubMed10600383
UniProtQ46079|CSLB_PEDHD Chondroitinase-B (Gene Name=cslB)

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