Structure of PDB 1d7y Chain A

Receptor sequence
>1d7yA (length=401) Species: 307 (Pseudomonas sp. KKS102) [Search protein sequence]
ALKAPVVVLGAGLASVSFVAELRQAGYQGLITVVGDEAERPYDRPPLSKD
FMAHGDAEKIRLDCKRAPEVEWLLGVTAQSFDPQAHTVALSDGRTLPYGT
LVLATGAAPRALPTLQGATMPVHTLRTLEDARRIQAGLRPQSRLLIVGGG
VIGLELAATARTAGVHVSLVETQPRLMSRAAPATLADFVARYHAAQGVDL
RFERSVTGSVDGVVLLDDGTRIAADMVVVGIGVLANDALARAAGLACDDG
IFVDAYGRTTCPDVYALGDVTRQRNPLSGRFERIETWSNAQNQGIAVARH
LVDPTAPGYAELPWYWSDQGALRIQVAGLASGDEEIVRGEVSLDAPKFTL
IELQKGRIVGATCVNNARDFAPLRRLLAVGAKPDRAALADPATDLRKLAA
A
3D structure
PDB1d7y Crystal structure of NADH-dependent ferredoxin reductase component in biphenyl dioxygenase.
ChainA
Resolution2.1 Å
3D
structure
Catalytic site residues are labeled in the structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Catalytic site (original residue number in PDB) L17 R48 P49 Q295
Catalytic site (residue number reindexed from 1) L13 R44 P45 Q291
Enzyme Commision number ?
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 FAD A G16 L17 A18 D40 E41 R48 P49 K53 A82 T109 G110 R130 I156 G272 D273 T290 W291 W320 G12 L13 A14 D36 E37 R44 P45 K49 A78 T105 G106 R126 I152 G268 D269 T286 W287 W316
Gene Ontology
Molecular Function
GO:0000166 nucleotide binding
GO:0016491 oxidoreductase activity
GO:0016651 oxidoreductase activity, acting on NAD(P)H
Cellular Component
GO:0005737 cytoplasm

View graph for
Molecular Function

View graph for
Cellular Component
External links
PDB RCSB:1d7y, PDBe:1d7y, PDBj:1d7y
PDBsum1d7y
PubMed11090282
UniProtQ52437

[Back to BioLiP]