Structure of PDB 1d0e Chain A

Receptor sequence
>1d0eA (length=259) Species: 11801 (Moloney murine leukemia virus) [Search protein sequence]
GSHMTWLSDFPQAWAETGGMGLAVRQAPLIIPLKATSTPVSIKQYPMSQE
ARLGIKPHIQRLLDQGILVPCQSPWNTPLLPVKKPGTNDYRPVQDLREVN
KRVEDIHPTVPNPYNLLSGLPPSHQWYTVLDLKDAFFCLRLHPTSQPLFA
FEWRDPEMGISGQLTWTRLPQGFKNSPTLFDEALHRDLADFRIQHPDLIL
LQYVDDLLLAATSELDCQQGTRALLQTLGNLGYRASAKKAQICQKQVKYL
GYLLKEGQR
3D structure
PDB1d0e Crystal structures of an N-terminal fragment from Moloney murine leukemia virus reverse transcriptase complexed with nucleic acid: functional implications for template-primer binding to the fingers domain
ChainA
Resolution3.0 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 2.7.7.-
2.7.7.49: RNA-directed DNA polymerase.
2.7.7.7: DNA-directed DNA polymerase.
3.1.-.-
3.1.26.4: ribonuclease H.
3.4.23.-
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 dna A Y64 S67 V101 P104 R116 Y45 S48 V82 P85 R97
BS02 dna A L99 D114 L115 R116 L80 D95 L96 R97
External links
PDB RCSB:1d0e, PDBe:1d0e, PDBj:1d0e
PDBsum1d0e
PubMed10669612
UniProtP03355|POL_MLVMS Gag-Pol polyprotein (Gene Name=gag-pol)

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