Structure of PDB 1cf0 Chain A
Receptor sequence
>1cf0A (length=138) Species:
9606
(Homo sapiens) [
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GWNAYIDNLMADGTCQDAAIVGYKDSPSVWAAVPGKTFVNITPAEVGVLV
GKDRSSFYVNGLTLGGQKCSVIRDSLLQDGEFSMDLRTKSTGGAPTFNVT
VTKTDKTLVLLMGKEGVHGGLINKKCYEMASHLRRSQY
3D structure
PDB
1cf0
Profilin binds proline-rich ligands in two distinct amide backbone orientations.
Chain
A
Resolution
2.2 Å
3D
structure
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Enzymatic activity
Enzyme Commision number
?
Interaction with ligand
Site
#
Ligand
Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01
peptide
A
G2 W3 Y6 W31 M130 H133 Y139
G1 W2 Y5 W30 M129 H132 Y138
Gene Ontology
Molecular Function
GO:0000774
adenyl-nucleotide exchange factor activity
GO:0001784
phosphotyrosine residue binding
GO:0003723
RNA binding
GO:0003779
actin binding
GO:0003785
actin monomer binding
GO:0005515
protein binding
GO:0005546
phosphatidylinositol-4,5-bisphosphate binding
GO:0031267
small GTPase binding
GO:0045296
cadherin binding
GO:0070064
proline-rich region binding
Biological Process
GO:0001843
neural tube closure
GO:0006357
regulation of transcription by RNA polymerase II
GO:0010634
positive regulation of epithelial cell migration
GO:0030036
actin cytoskeleton organization
GO:0030833
regulation of actin filament polymerization
GO:0030837
negative regulation of actin filament polymerization
GO:0030838
positive regulation of actin filament polymerization
GO:0032232
negative regulation of actin filament bundle assembly
GO:0032233
positive regulation of actin filament bundle assembly
GO:0032781
positive regulation of ATP-dependent activity
GO:0044087
regulation of cellular component biogenesis
GO:0050804
modulation of chemical synaptic transmission
GO:0050821
protein stabilization
GO:0051497
negative regulation of stress fiber assembly
GO:0060074
synapse maturation
GO:0098885
modification of postsynaptic actin cytoskeleton
GO:0110053
regulation of actin filament organization
GO:1900029
positive regulation of ruffle assembly
Cellular Component
GO:0005634
nucleus
GO:0005737
cytoplasm
GO:0005829
cytosol
GO:0005856
cytoskeleton
GO:0005925
focal adhesion
GO:0005938
cell cortex
GO:0016020
membrane
GO:0070062
extracellular exosome
GO:0072562
blood microparticle
GO:0098978
glutamatergic synapse
View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB
RCSB:1cf0
,
PDBe:1cf0
,
PDBj:1cf0
PDBsum
1cf0
PubMed
10404225
UniProt
P07737
|PROF1_HUMAN Profilin-1 (Gene Name=PFN1)
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