Structure of PDB 1bm1 Chain A

Receptor sequence
>1bm1A (length=221) Species: 2242 (Halobacterium salinarum) [Search protein sequence]
RPEWIWLALGTALMGLGTLYFLVKGMGVSDPDAKKFYAITTLVPAIAFTM
YLSMLLGYGLTMVPFGGEQNPIYWARYADWLFTTPLLLLDLALLVDADQG
TILALVGADGIMIGTGLVGALTKVYSYRFVWWAISTAAMLYILYVLFFGF
TSKAESMRPEVASTFKVLRNVTVVLWSAYPVVWLIGSEGAGIVPLNIETL
LFMVLDVSAKVGFGLILLRSR
3D structure
PDB1bm1 Specific lipid-protein interactions in a novel honeycomb lattice structure of bacteriorhodopsin.
ChainA
Resolution3.5 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 RET A W86 T89 M118 S141 Y185 P186 W189 K216 W80 T83 M112 S135 Y179 P180 W183 K210
Gene Ontology
Molecular Function
GO:0005216 monoatomic ion channel activity
GO:0009881 photoreceptor activity
GO:0015454 light-driven active monoatomic ion transmembrane transporter activity
Biological Process
GO:0006811 monoatomic ion transport
GO:0007602 phototransduction
GO:1902600 proton transmembrane transport
Cellular Component
GO:0005886 plasma membrane
GO:0016020 membrane

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Biological Process
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Cellular Component
External links
PDB RCSB:1bm1, PDBe:1bm1, PDBj:1bm1
PDBsum1bm1
PubMed10393291
UniProtP02945|BACR_HALSA Bacteriorhodopsin (Gene Name=bop)

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