Structure of PDB 1bj6 Chain A

Receptor sequence
>1bj6A (length=42) Species: 11676 (Human immunodeficiency virus 1) [Search protein sequence]
NVKCFNCGKEGHTARNCRAPRKKGCWKCGKEGHQMKDCTERQ
3D structure
PDB1bj6 Structure of the complex between the HIV-1 nucleocapsid protein NCp7 and the single-stranded pentanucleotide d(ACGCC).
ChainA
ResolutionN/A
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 dna A V13 F16 T24 R26 R32 K33 G35 C36 W37 Q45 M46 K47 V2 F5 T13 R15 R21 K22 G24 C25 W26 Q34 M35 K36
BS02 ZN A C15 C18 H23 C28 C4 C7 H12 C17
BS03 ZN A C36 C39 H44 C49 C25 C28 H33 C38
Gene Ontology
Molecular Function
GO:0003676 nucleic acid binding
GO:0008270 zinc ion binding

View graph for
Molecular Function
External links
PDB RCSB:1bj6, PDBe:1bj6, PDBj:1bj6
PDBsum1bj6
PubMed9769215
UniProtQ74084

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