Structure of PDB 1aq3 Chain A

Receptor sequence
>1aq3A (length=129) Species: 12022 (Escherichia phage MS2) [Search protein sequence]
ASNFTQFVLVDNGGTGDVTVAPSNFANGVAEWISSNSRSQAYKVTCSVRQ
SSAQNRKYSIKVEVPKVATQTVGGVELPVAAWRSYLNMELTIPIFATNSD
CELIVKAMQGLLKDGNPIPSAIAANSGIY
3D structure
PDB1aq3 Crystal structures of MS2 coat protein mutants in complex with wild-type RNA operator fragments.
ChainA
Resolution2.8 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna A T45 C46 S47 R49 S59 K61 E63 Y85 T45 C46 S47 R49 S59 K61 E63 Y85
Gene Ontology
Molecular Function
GO:0003723 RNA binding
GO:0005198 structural molecule activity
GO:0042802 identical protein binding
Biological Process
GO:0006417 regulation of translation
GO:1904972 negative regulation of viral translation
Cellular Component
GO:0019028 viral capsid
GO:0039617 T=3 icosahedral viral capsid

View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:1aq3, PDBe:1aq3, PDBj:1aq3
PDBsum1aq3
PubMed9469847
UniProtP03612|CAPSD_BPMS2 Capsid protein

[Back to BioLiP]