Structure of PDB 8bd3 Chain 9

Receptor sequence
>8bd39 (length=222) Species: 2649997 (Chlorella ohadii) [Search protein sequence]
EFYGPDRAKWLGPFSEGSVPSYLKGEFPGDYGWDTAGLSADPETFARYRE
IEVIHARWAMLGALGCLTPELLQNNGAADFGEAAVWFKAGASIFNEDGLN
YLGNPSLIHAQSIVAVLLTQLVIMGAAEAYRYSGEGPVETSGDSLYPGGF
FDPLGLADDPDTLAELKVKEIKNGRLAMFSMFGFFVQGLVTGKSPLENLA
DHLAEPSVNNGFASATKFLPLP
3D structure
PDB8bd3 Structure of Chlorella ohadii Photosystem II Reveals Protective Mechanisms against Environmental Stress.
Chain9
Resolution2.73 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 CHL 9 F251 A254 T255 F257 L258 P259 F212 A215 T216 F218 L219 P220
BS02 CHL 9 W49 T74 W10 T35
BS03 CLA 9 W125 F126 L228 F257 W86 F87 L189 F218
BS04 CHL 9 K48 W49 L50 G51 Y70 W72 K9 W10 L11 G12 Y31 W33
BS05 CLA 9 G68 D69 Y70 G71 W72 D73 S78 F84 Y87 R88 E91 R214 M217 G29 D30 Y31 G32 W33 D34 S39 F45 Y48 R49 E52 R175 M178
BS06 CLA 9 Y87 I90 H94 F224 Y48 I51 H55 F185
BS07 CLA 9 L100 L103 G104 T107 F119 L138 Y140 L141 L146 I147 L61 L64 G65 T68 F80 L99 Y101 L102 L107 I108
BS08 CHL 9 S145 L146 I147 H148 A149 Q150 S151 S106 L107 I108 H109 A110 Q111 S112
BS09 CHL 9 G129 L138 T158 Q159 I162 M163 G90 L99 T119 Q120 I123 M124
BS10 CHL 9 F126 K127 G129 A130 Q159 F87 K88 G90 A91 Q120
BS11 CHL 9 R96 W97 A166 Y169 R170 E174 G175 T179 L184 P186 F190 R57 W58 A127 Y130 R131 E135 G136 T140 L145 P147 F151
BS12 CHL 9 E89 I90 I93 H94 W97 M163 G164 E167 R170 E50 I51 I54 H55 W58 M124 G125 E128 R131
BS13 CLA 9 R96 M99 L100 Y185 P186 G187 F190 D191 L195 L205 K206 E209 R57 M60 L61 Y146 P147 G148 F151 D152 L156 L166 K167 E170
BS14 CLA 9 F41 K208 K211 N212 F2 K169 K172 N173
BS15 CLA 9 L205 K208 N212 L215 L166 K169 N173 L176
BS16 CLA 9 F218 F221 G222 V225 Q226 L238 H241 N249 G250 F179 F182 G183 V186 Q187 L199 H202 N210 G211
BS17 CLA 9 H241 L242 P245 F251 H202 L203 P206 F212
BS18 RRX 9 M99 L100 L103 F190 D191 S219 F223 Q226 P234 L238 M60 L61 L64 F151 D152 S180 F184 Q187 P195 L199
Gene Ontology
Biological Process
GO:0009765 photosynthesis, light harvesting
Cellular Component
GO:0016020 membrane

View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:8bd3, PDBe:8bd3, PDBj:8bd3
PDBsum8bd3
PubMed37566050
UniProtA0A2P6TDA6

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