Structure of PDB 7paj Chain 9

Receptor sequence
>7paj9 (length=393) Species: 272634 (Mycoplasmoides pneumoniae M129) [Search protein sequence]
AREKFDRSKPHVNVGTIGHIDHGKTTLTAAICTVLAKEGKSAATRYDQID
KAPEEKARGITINSAHVEYSSDKRHYAHVDCPGHADYIKNMITGAAQMDG
AILVVSATDSVMPQTREHILLARQVGVPRMVVFLNKCDIATDEEVQELVA
EEVRDLLTSYGFDGKNTPIIYGSALKALEGDPKWEAKIHDLMNAVDEWIP
TPEREVDKPFLLAIEDTMTITGRGTVVTGRVERGELKVGQEIEIVGLRPI
RKAVVTGIEMFKKELDSAMAGDNAGVLLRGVDRKEVERGQVLAKPGSIKP
HKKFKAEIYALKKEEGGRHTGFLNGYRPQFYFRTTDVTGSISLPENTEMV
LPGDNTSITVELIAPIACEKGSKFSIREGGRTVGAGSVTEVLE
3D structure
PDB7paj Visualizing translation dynamics at atomic detail inside a bacterial cell.
Chain9
Resolution7.3 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna 9 R3 T222 G223 R224 R280 D283 R2 T221 G222 R223 R279 D282
BS02 rna 9 Y88 R289 R319 T321 G322 L324 G326 Y327 R328 Q330 T339 I364 E379 G380 Y87 R288 R318 T320 G321 L323 G325 Y326 R327 Q329 T338 I363 E378 G379
Gene Ontology
Molecular Function
GO:0001968 fibronectin binding
GO:0003746 translation elongation factor activity
GO:0003924 GTPase activity
GO:0005515 protein binding
GO:0005525 GTP binding
Biological Process
GO:0006412 translation
GO:0006414 translational elongation
Cellular Component
GO:0005737 cytoplasm
GO:0005829 cytosol
GO:0009897 external side of plasma membrane
GO:0016020 membrane

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:7paj, PDBe:7paj, PDBj:7paj
PDBsum7paj
PubMed36171285
UniProtP23568|EFTU_MYCPN Elongation factor Tu (Gene Name=tuf)

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