Structure of PDB 3j6b Chain 9

Receptor sequence
>3j6b9 (length=195) Species: 4932 (Saccharomyces cerevisiae) [Search protein sequence]
VIYLHKGPRINGLRRDPESYLRNPSGVLFTEVKECQDKVRSILQLPKYGI
NLSNELILQCLTHKSFAHGSKPYNEKLNLLGAQFLKLQTCIHSLKNLQFS
NLGTKFAKELTSKNTACTFVKLHNLGPFIFWKMRDPIKGHINGETTIFAS
VLNAFIGAILSTNGSEKAAKFIQGSLLDKEHSLVNIANENVASAK
3D structure
PDB3j6b Structure of the yeast mitochondrial large ribosomal subunit.
Chain9
Resolution3.2 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna 9 R37 L41 R42 R43 Y48 H98 K175 R177 I185 N186 G187 R9 L13 R14 R15 Y20 H68 K132 R134 I141 N142 G143
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
GO:0004525 ribonuclease III activity
Biological Process
GO:0006396 RNA processing
GO:0032543 mitochondrial translation
Cellular Component
GO:0005739 mitochondrion
GO:0005743 mitochondrial inner membrane
GO:0005762 mitochondrial large ribosomal subunit
GO:0005840 ribosome
GO:1990904 ribonucleoprotein complex

View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:3j6b, PDBe:3j6b, PDBj:3j6b
PDBsum3j6b
PubMed24675956
UniProtP36523|RM15_YEAST Large ribosomal subunit protein mL57 (Gene Name=MRPL15)

[Back to BioLiP]