Structure of PDB 8ekc Chain 8

Receptor sequence
>8ekc8 (length=38) Species: 562 (Escherichia coli) [Search protein sequence]
MKVRASVKKLCRNCKIVKRDGVIRVICSAEPKHKQRQG
3D structure
PDB8ekc Insights into the molecular mechanism of translation inhibition by the ribosome-targeting antibiotic thermorubin.
Chain8
Resolution2.7 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna 8 M1 K2 R4 A5 S6 V7 K8 R19 K32 K34 Q37 G38 M1 K2 R4 A5 S6 V7 K8 R19 K32 K34 Q37 G38
BS02 ZN 8 C11 C27 H33 C11 C27 H33
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
Biological Process
GO:0002181 cytoplasmic translation
GO:0006412 translation
Cellular Component
GO:0005737 cytoplasm
GO:0005840 ribosome
GO:0022625 cytosolic large ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:8ekc, PDBe:8ekc, PDBj:8ekc
PDBsum8ekc
PubMed36546783
UniProtP0A7Q6|RL36_ECOLI Large ribosomal subunit protein bL36A (Gene Name=rpmJ)

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