Structure of PDB 7zki Chain 7

Receptor sequence
>7zki7 (length=595) Species: 272844 (Pyrococcus abyssi GE5) [Search protein sequence]
RIRQPIIAVLGHVDHGKTTLLDRIRKTNVAAKEAGGITQHIGATEVPIEV
VKKIAGPLIKLWKAEIKLPGLLFIDTPGHEAFTSLRARGGSLADLAVLVV
DINEGFQPQTIESIEILRKYRTPFVVAANKIDRIKGWVIEEDEPFLMNIK
KQDQRAVQELETKLWELIGKFYEFGFQANRFDRVQNFTRELAIVPISAKY
GIGIAELLVLIAGLSQRYLEEKLKIEVEGPARGTILEVREEPGLGHTIDV
IIYDGTLHKDDTIVVGGKDKAIVTKIRALLKPKPLDEIRDPRFRFDYVDE
VTAAAGVKIAAPGLEEALAGSPVIAAPTPEDVEKAKQEILEQIERVVIST
DKVGVIVKADTLGSLEALSKELQEKEIPIRKADVGNVSKTDVMEALSVKE
EEPKYGVILGFNVKVNEDAEEVAKAKDVKIFVGNVIYKLIEDYEEWVKEE
EEKKKRELLSKVTFPGVIRLYPDERYVFRRSNPAIVGIEVIEGRIKPGVT
LIKQNGQKVGVIRSIKSRDEFLQEAKKGQAVAIAIEGAIVGRHIHPGETL
YVDLSRDDAITLLKHLRDTLEDTDIKALKMIAKVKAKEDPFWRAI
3D structure
PDB7zki Role of aIF5B in archaeal translation initiation.
Chain7
Resolution3.6 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna 7 F481 R482 R483 S517 K519 R521 A535 A537 R545 F478 R479 R480 S514 K516 R518 A532 A534 R542
BS02 MET 7 Y479 F481 A533 V534 Y476 F478 A530 V531
BS03 GNP 7 D17 G19 K20 T21 T22 K133 D135 K202 D14 G16 K17 T18 T19 K130 D132 K199
BS04 MG 7 T21 T41 T18 T38
Gene Ontology
Molecular Function
GO:0003743 translation initiation factor activity
GO:0003924 GTPase activity
GO:0005525 GTP binding
Biological Process
GO:0006413 translational initiation

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Molecular Function
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Biological Process
External links
PDB RCSB:7zki, PDBe:7zki, PDBj:7zki
PDBsum7zki
PubMed35694843
UniProtQ9UZK7|IF2P_PYRAB Probable translation initiation factor IF-2 (Gene Name=infB)

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