Structure of PDB 8pkl Chain 6

Receptor sequence
>8pkl6 (length=64) Species: 562 (Escherichia coli) [Search protein sequence]
PKIKTVRGAAKRFKKTGKGGFKHKHANLRHILTKKATKRKRHLRPKAMVS
KGDLGLVIACLPYA
3D structure
PDB8pkl Transient disome complex formation in native polysomes during ongoing protein synthesis captured by cryo-EM.
Chain6
Resolution3.09 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna 6 P2 K3 I4 K5 T6 R8 K12 R13 T17 K19 K23 H26 N28 R30 H31 I32 L33 T34 K35 T38 K39 R40 R42 H43 R45 K47 M49 S51 K52 D54 Y64 P1 K2 I3 K4 T5 R7 K11 R12 T16 K18 K22 H25 N27 R29 H30 I31 L32 T33 K34 T37 K38 R39 R41 H42 R44 K46 M48 S50 K51 D53 Y63
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
Biological Process
GO:0002181 cytoplasmic translation
GO:0006412 translation
Cellular Component
GO:0005737 cytoplasm
GO:0005840 ribosome
GO:0022625 cytosolic large ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Cellular Component
External links
PDB RCSB:8pkl, PDBe:8pkl, PDBj:8pkl
PDBsum8pkl
PubMed38409277
UniProtP0A7Q1|RL35_ECOLI Large ribosomal subunit protein bL35 (Gene Name=rpmI)

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