Structure of PDB 8fzi Chain 6

Receptor sequence
>8fzi6 (length=46) Species: 562 (Escherichia coli) [Search protein sequence]
MKRTFQPSVLKRNRSHGFRARMATKNGRQVLARRRAKGRARLTVSK
3D structure
PDB8fzi The ribosome termination complex remodels release factor RF3 and ejects GDP.
Chain6
Resolution3.1 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 rna 6 M1 R3 T4 F5 Q6 P7 S8 V9 K11 R12 N13 R14 H16 F18 R19 K25 N26 R33 R34 K37 G38 R39 A40 S45 M1 R3 T4 F5 Q6 P7 S8 V9 K11 R12 N13 R14 H16 F18 R19 K25 N26 R33 R34 K37 G38 R39 A40 S45
Gene Ontology
Cellular Component
GO:0005840 ribosome
GO:1990904 ribonucleoprotein complex

View graph for
Biological Process

View graph for
Cellular Component
External links
PDB RCSB:8fzi, PDBe:8fzi, PDBj:8fzi
PDBsum8fzi
PubMed39030416
UniProtB7MGC4|RL34_ECO45 Large ribosomal subunit protein bL34 (Gene Name=rpmH)

[Back to BioLiP]