Structure of PDB 8d8l Chain 6

Receptor sequence

>8d8l6 (length=305) Species: 4932 (Saccharomyces cerevisiae) [Search protein sequence]

FSRRRIAYPFYPFKKLGRQHPKKHDTNLKTAMRQFLGPKNYKGEYVMNKY
FTVPTNHVPNYIKPDLERGQSLEHPVTKKPLQLRYDGTLGPPPVENKRLQ
NIFKDRLLQPFPSNPHCKTNYVLSPQLKQSIFEEITVEGLSAQQVSQKYG
LKIPRVEAIVKLVSVENSWNRRNRVSSDLKTMDETLYRMFPVFDSDASFK
RENLSEIPVPQKTLASRFLTIAESEPFGPVDAAHVLELEPAVETLRNLST
NTKVIYGELVEGERSQYKFTNAKVGKVGYRYGSGNRDNKKDRRIGFNKLG
QMVYI

3D structure

PDB

8d8l Principles of mitoribosomal small subunit assembly in eukaryotes.

Chain

Resolution

2.6 Å

3D
structure

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Enzymatic activity

Enzyme Commision number

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	rna	6	F27 S28 R29 R30 Y34 K41 L42 R44 Q45 H46 P47 K48 K49 H50 T52 N53 K55 K65 N66 Y67 M73 H100 P101 L115 R198 R200 R304 G322 G324 N325 R326 D327 N328 K329 K330 R332 Y344	F1 S2 R3 R4 Y8 K15 L16 R18 Q19 H20 P21 K22 K23 H24 T26 N27 K29 K39 N40 Y41 M47 H74 P75 L89 R172 R174 R264 G282 G284 N285 R286 D287 N288 K289 K290 R292 Y304

Gene Ontology

	Molecular Function
GO:0003735	structural constituent of ribosome

	Biological Process
GO:0032543	mitochondrial translation

	Cellular Component
GO:0005739	mitochondrion
GO:0005743	mitochondrial inner membrane
GO:0005763	mitochondrial small ribosomal subunit
GO:0005840	ribosome
GO:1990904	ribonucleoprotein complex

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Molecular Function

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Biological Process

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Cellular Component

External links

PDB	RCSB:8d8l, PDBe:8d8l, PDBj:8d8l
PDBsum	8d8l
PubMed	36482135
UniProt	P53292\|RT35_YEAST Small ribosomal subunit protein mS45 (Gene Name=MRPS35)

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