Structure of PDB 7zs9 Chain 6

Receptor sequence
>7zs96 (length=383) Species: 4932 (Saccharomyces cerevisiae) [Search protein sequence]
GGYAWEDEIKRSWDLVKVMASLVASIVEARKKRTAKKNITPYQRGIIRSL
ILTLDCSEAMLEKDLRPNRHAMIIQYAIDFVHEFFDQNPISQMGIIIMRN
GLAQLVSQVSGNPQDHIDALKSIRKQEPKGNPSLQNALEMARGLLLPVPA
HCTREVLIVFGSLSTTDPGDIHQTIDSLVSEKIRVKVLGLSAQVAICKEL
CKATNYGDESFYKILLDETHLKELFNEAVTPLPVNKINKGFTLVKMGFPT
RIFEDTPTFCSCHSKLVYGGYFCPNCHSKVCSLPTVCPCCDLMLILSTHL
ARSYHHLMPLKTFAEVPTTEKFRSEDCFSCQSRFPILKNHKNGKLLTSSR
YRCEDCKQEFCVDCDVFIHEILHNCPGCESKPV
3D structure
PDB7zs9 Structures of transcription preinitiation complex engaged with the +1 nucleosome.
Chain6
Resolution3.1 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 ZN 6 C349 C352 C363 C273 C276 C287
BS02 ZN 6 C403 C406 C440 C327 C330 C364
BS03 ZN 6 C429 C451 C353 C375
BS04 ZN 6 C336 H339 C260 H263
Gene Ontology
Molecular Function
GO:0008270 zinc ion binding
GO:0046872 metal ion binding
GO:0061630 ubiquitin protein ligase activity
Biological Process
GO:0006281 DNA repair
GO:0006289 nucleotide-excision repair
GO:0006351 DNA-templated transcription
GO:0006357 regulation of transcription by RNA polymerase II
GO:0006366 transcription by RNA polymerase II
GO:0006367 transcription initiation at RNA polymerase II promoter
Cellular Component
GO:0000112 nucleotide-excision repair factor 3 complex
GO:0000439 transcription factor TFIIH core complex
GO:0005634 nucleus
GO:0005675 transcription factor TFIIH holo complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:7zs9, PDBe:7zs9, PDBj:7zs9
PDBsum7zs9
PubMed36411341
UniProtQ04673|SSL1_YEAST General transcription and DNA repair factor IIH subunit SSL1 (Gene Name=SSL1)

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