Structure of PDB 6ijo Chain 6

Receptor sequence
>6ijo6 (length=230) Species: 3055 (Chlamydomonas reinhardtii) [Search protein sequence]
SRPLWLPGSTPPAHLKGDLPGDFGFDPLGLGANAESLKWFKESELVHSRW
AMAAVAGILVQEIVRPDVFWYNAGKEVESPLGPLGLLAVEFFLMHWVEVR
RWQDLRKPGSVDQDPIFSQYKLPPHEVGYPGGVFAPFIPGDLAELKVKEI
KNGRLAMLAFVGFVMAAQVTGKGPIAALQEHLADPWGTTIFSKAAVVPGQ
AVAPPCKIPASVSYKGIEIPTPCFLQGLWP
3D structure
PDB6ijo Antenna arrangement and energy transfer pathways of a green algal photosystem-I-LHCI supercomplex.
Chain6
Resolution3.3 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 CLA 6 F180 W184 R188 Q191 F92 W96 R100 Q103
BS02 CLA 6 V177 F180 L181 V89 F92 L93
BS03 CLA 6 L92 W93 L94 P95 F111 F113 L4 W5 L6 P7 F23 F25
BS04 CLA 6 L103 G109 D110 F111 G112 F113 D114 L118 F128 K129 E132 H135 R242 M245 L246 L15 G21 D22 F23 G24 F25 D26 L30 F40 K41 E44 H47 R154 M157 L158
BS05 CLA 6 W127 F128 H135 W39 F40 H47
BS06 CLA 6 A141 G145 V148 R153 V165 A53 G57 V60 R65 V77
BS07 CLA 6 W138 S167 L174 E178 W50 S79 L86 E90
BS08 CLA 6 Y159 N160 G162 K163 L175 E178 V300 Y302 T309 Y71 N72 G74 K75 L87 E90 V212 Y214 T221
BS09 CLA 6 R137 W138 V185 R188 R189 D192 V199 G216 R49 W50 V97 R100 R101 D104 V111 G128
BS10 CLA 6 W127 S131 V134 W138 F179 M182 H183 E186 R189 W39 S43 V46 W50 F91 M94 H95 E98 R101
BS11 CLA 6 R137 M140 Y217 P218 G219 F222 A223 I226 L233 K234 K236 E237 R49 M52 Y129 P130 G131 F134 A135 I138 L145 K146 K148 E149
BS12 CLA 6 K236 K239 K148 K151
BS13 CLA 6 K236 N240 L243 K148 N152 L155
BS14 CLA 6 L246 G250 M253 H269 T276 T277 I278 L158 G162 M165 H181 T188 T189 I190
BS15 CLA 6 H269 P273 T277 H181 P185 T189
BS16 CLA 6 F279 A282 A283 V284 P286 P318 F191 A194 A195 V196 P198 P230
BS17 CLA 6 F179 H183 W190 F91 H95 W102
BS18 CLA 6 R188 D202 P203 I204 F205 Y208 K209 V221 R100 D114 P115 I116 F117 Y120 K121 V133
BS19 CLA 6 M253 I278 F312 L313 L316 W317 P318 M165 I190 F224 L225 L228 W229 P230
BS20 CLA 6 P310 C311 F312 L313 Q314 P222 C223 F224 L225 Q226
Gene Ontology
Molecular Function
GO:0016168 chlorophyll binding
Biological Process
GO:0009416 response to light stimulus
GO:0009765 photosynthesis, light harvesting
GO:0009768 photosynthesis, light harvesting in photosystem I
GO:0015979 photosynthesis
Cellular Component
GO:0009507 chloroplast
GO:0009522 photosystem I
GO:0009523 photosystem II
GO:0009535 chloroplast thylakoid membrane
GO:0009579 thylakoid
GO:0016020 membrane

View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:6ijo, PDBe:6ijo, PDBj:6ijo
PDBsum6ijo
PubMed30850819
UniProtQ75VY6

[Back to BioLiP]