Structure of PDB 5j8b Chain 6

Receptor sequence
>5j8b6 (length=53) Species: 300852 (Thermus thermophilus HB8) [Search protein sequence]
ASEVRIKLLLECTECKRRNYATEKNKRNTPNKLELRKYCPWCRKHTVHRE
VKI
3D structure
PDB5j8b Elongation factor 4 remodels the A-site tRNA on the ribosome.
Chain6
Resolution2.6 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna 6 A2 S3 R6 K8 R18 R19 Y21 E24 K25 N26 N29 L34 L36 R37 K38 Y39 W42 R44 H46 I54 A1 S2 R5 K7 R17 R18 Y20 E23 K24 N25 N28 L33 L35 R36 K37 Y38 W41 R43 H45 I53
BS02 rna 6 K27 P31 K53 K26 P30 K52
BS03 MG 6 Y39 H46 Y38 H45
BS04 ZN 6 C13 C16 C40 C43 C12 C15 C39 C42
Gene Ontology
Molecular Function
GO:0000049 tRNA binding
GO:0003735 structural constituent of ribosome
GO:0019843 rRNA binding
Biological Process
GO:0006412 translation
Cellular Component
GO:0005737 cytoplasm
GO:0005840 ribosome
GO:1990904 ribonucleoprotein complex

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Molecular Function
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Cellular Component
External links
PDB RCSB:5j8b, PDBe:5j8b, PDBj:5j8b
PDBsum5j8b
PubMed27092003
UniProtP35871|RL33_THET8 Large ribosomal subunit protein bL33 (Gene Name=rpmG)

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