Structure of PDB 8fni Chain 5

Receptor sequence
>8fni5 (length=296) Species: 5691 (Trypanosoma brucei) [Search protein sequence]
LHAFVRSPHYRTIPSAGPNGIVVNRDMLVHQFRDFYKTLQHCSLVDKVHL
MSERPSVEALRVADQMVSIGATFLEMPLTGMEHRATEFMESMRYVRGAGG
PSTLASYLQDTENCRCNSGDVVCLPNGIAVGHGPRTNAVAHTTLKQLFEV
KDDQFSFDVFTLEQEGDAPPLGDYFGFAGSNVLLTWKDEHGLLAVDQYQQ
KQPHTEMNVVYLEPGCHFLSFYGVDHTIDVLVQKGYERSMDSIAAAGLNP
IPVQWSEMDKLGISMRAAVLPLKFFKANVGGMLSRNKSRGARWQTH
3D structure
PDB8fni Structural basis of gRNA stabilization and mRNA recognition in trypanosomal RNA editing.
Chain5
Resolution3.4 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna 5 M292 R295 M282 R285
BS02 rna 5 Y20 R21 Y10 R11
Gene Ontology
Biological Process
GO:0009451 RNA modification
GO:0016070 RNA metabolic process
GO:0090615 mitochondrial mRNA processing
Cellular Component
GO:0005737 cytoplasm
GO:0005739 mitochondrion
GO:0031019 mitochondrial mRNA editing complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:8fni, PDBe:8fni, PDBj:8fni
PDBsum8fni
PubMed37410820
UniProtQ389F5

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