Structure of PDB 6l35 Chain 5

Receptor sequence

>6l355 (length=202) Species: 3218 (Physcomitrium patens)

RPLWLPGTTPPAHLDGTLAGDFGFDPLGLGQDPQDLRWYVQAELVHSRFA
MAGVAGILFTDLLRASGRTDIPVWFEAGATKFDFADTTTLFVVQLILMGF
VETKRWMDIVKPGSQAAEDSFFGFEAAFEGLETGYPGGPLFNPLGFANDP
TKPQPLRWKEIKNGRLAMVAMVGFMVQAYVTKTGPIENLLTHLSDPVHNT
II

3D structure

• PDB: 6l35 Antenna arrangement and energy-transfer pathways of PSI-LHCI from the moss Physcomitrella patens.
• Chain: 5
• Resolution: 3.23 Å

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	CHL	5	F171 T174 K175 E189	F100 T103 K104 E118
BS02	CLA	5	W75 P77 F93 F95	W4 P6 F22 F24
BS03	CLA	5	G91 D92 F93 F95 Y110 V111 E114 R236 M239	G20 D21 F22 F24 Y39 V40 E43 R165 M168
BS04	CLA	5	W109 Y110 H117	W38 Y39 H46
BS05	CLA	5	A126 G127 I142 P143	A55 G56 I71 P72
BS06	CHL	5	L161 Q165	L90 Q94
BS07	CHL	5	G149 A150 T151 T158 F162 Q165	G78 A79 T80 T87 F91 Q94
BS08	CHL	5	R119 F120 V172 K175 R176 D179 G205 F212	R48 F49 V101 K104 R105 D108 G134 F141
BS09	CLA	5	W109 A113 V116 H117 F120 M169 E173 R176 W177	W38 A42 V45 H46 F49 M98 E102 R105 W106
BS10	CLA	5	R119 M122 L202 Y206 P207 F217 A218 L227 E231	R48 M51 L131 Y135 P136 F146 A147 L156 E160
BS11	CLA	5	W229 K230 K233 N234	W158 K159 K162 N163
BS12	CLA	5	K230 N234	K159 N163
BS13	CLA	5	V240 A241 G244 V247 Q248 N259 H263 I272	V169 A170 G173 V176 Q177 N188 H192 I201
BS14	CLA	5	H263 L264 P267	H192 L193 P196
BS15	CHL	5	K175 A188 E189 D190 E196	K104 A117 E118 D119 E125

Gene Ontology

Biological Process

• GO:0009765 photosynthesis, light harvesting

Cellular Component

• GO:0016020 membrane

External links

• PDB: RCSB:6l35, PDBe:6l35, PDBj:6l35
• PDBsum: 6l35
• PubMed: 33589616
• UniProt: A0A2K1KN29