Structure of PDB 4wz7 Chain 5

Receptor sequence

>4wz75 (length=619) Species: 4952 (Yarrowia lipolytica)

AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAALDINYNFEIDALTITMLLAITTISSMVHIY
SIGYMETDPHQVRFFSLLSMFTFWMIILVTGSNYFVLFVGWEFIGVTSYL
LISFWVTRLQAMKSALSAVLMNRFGDAFFVLGLCVIAYVFGAAAAAAAAA
AAAATDLLVLIMLALFIAAMAKSAQFGLHNWLTLAMEGPTPVSSLLHAAT
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAKRIIAL
STMSQLGMMTIAIGLSAYNLALFHLLGHAFFKALLFMSAGSIIHSILAAA
AAAAAAAAAAAALPYTYICITIASLSLMAMPGLTGYYTKDIIIESTYGSA
AAAAAAAYLSAVLTCVYSMKILYLTFAAAAAAAAAAAAAATLPMFILAIF
AMFAGWAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGLVTSGNIAH
HVDKGSLYRLGPVGIAAAAAAAAAAAAAAAMNSMLILITIVSLLLLVLVM
NVNFIIVIPVLISILYILF

3D structure

• PDB: 4wz7 Structural biology. Mechanistic insight from the crystal structure of mitochondrial complex I.
• Chain: 5
• Resolution: 3.6 Å

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	peptide	5	Y372 I375 G389 F463 M470 F471 W474	Y365 I368 G382 F445 M452 F453 W456

Gene Ontology

--> -->

UnboundLocalError

Python 3.6.8: /usr/bin/python3 Sat Feb 22 05:32:47 2025

A problem occurred in a Python script. Here is the sequence of function calls leading up to the error, in the order they occurred.

 /var/www/html/BioLiP/pdb.cgi in <module>()

   1443                 pubmed=display_regular_ligand(pdbid,asym_id,lig3,ligIdx,title)

   1444         else:

=> 1445             pubmed,uniprot=display_protein_receptor(pdbid,asym_id,title)

   1446     

   1447     uniprot_line=''

pubmed = '', uniprot = '', display_protein_receptor = <function display_protein_receptor>, pdbid = '4wz7', asym_id = '5', title = 'Structural biology. Mechanistic insight from the crystal structure of mitochondrial complex I.'

 /var/www/html/BioLiP/pdb.cgi in display_protein_receptor(pdbid='4wz7', asym_id='5', title='Structural biology. Mechanistic insight from the crystal structure of mitochondrial complex I.')

    839 

    840     if go:

=>  841         display_go(go,uniprot,pdbid,asym_id)

    842     return pubmed,uniprot

    843 

global display_go = <function display_go>, go = '0008137,0042773', uniprot = '', pdbid = '4wz7', asym_id = '5'

 /var/www/html/BioLiP/pdb.cgi in display_go(go='0008137,0042773', uniprot='', pdbid='4wz7', asym_id='5')

    480         '''.replace("$namespace_link",namespace_link

    481           ).replace("$namespace",namespace

=>  482           ).replace("$uniprot",u

    483         ))

    484         for l,(term,name) in enumerate(go2aspect[Aspect]):

u undefined

UnboundLocalError: local variable 'u' referenced before assignment
      args = ("local variable 'u' referenced before assignment",)
      with_traceback = <built-in method with_traceback of UnboundLocalError object>