Structure of PDB 7ymm Chain 41

Receptor sequence
>7ymm41 (length=329) Species: 329726 (Acaryochloris marina MBIC11017) [Search protein sequence]
EYPWYSGNSRLEDPAVQGKWLAAHIAQIALIVFWVGLNTFSENQAFDTSL
PMFDQGLVLIPHLAALGFGVGSGGVVTNTFVFTQIGAIHMVSSFVLFGGA
YFHAKIGPSVLATDQFAFSWDDPKKLGYILGHHLVLIGTGALLFVLWIKF
HGIYDPTIGEVRTVGDVVLKYGWFTPGYNCFFVDNLEDLASGHLFIGLVD
IAGGIFHINVAPLPWSKVVNKYTYSPDGLLGTAIGGLALMGFISAYFCAV
NTLVYPVEFFGPALEVKFGIAPYFKDTADLADGFYTSRAWLANITYYLAF
YMLQGHLYHTLKAMGFKFEDIPAVIARDT
3D structure
PDB7ymm Structure of a large photosystem II supercomplex from Acaryochloris marina.
Chain41
Resolution3.6 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 ZEX 41 F196 Y268 F174 Y246
BS02 ZEX 41 F264 Y268 F296 Y318 F242 Y246 F274 Y296
BS03 CL7 41 F159 L211 H215 I218 M262 S266 V276 Y277 F144 L189 H193 I196 M240 S244 V254 Y255
BS04 CL7 41 W43 H71 L158 S266 Y277 L313 W34 H62 L143 S244 Y255 L291
BS05 CL7 41 I40 V41 V44 L68 H71 L72 L75 H98 M262 I31 V32 V35 L59 H62 L63 L66 H89 M240
BS06 CL7 41 W43 G65 V67 W312 W34 G56 V58 W290
BS07 CL7 41 G250 G257 L261 L325 H328 L329 T332 M336 G228 G235 L239 L303 H306 L307 T310 M314
BS08 CL7 41 L145 L149 G225 F228 H229 P234 L235 W237 S238 L130 L134 G203 F206 H207 P212 L213 W215 S216
BS09 CL7 41 L141 L145 H148 I152 Y246 L251 M262 L126 L130 H133 I137 Y224 L229 M240
BS10 CL7 41 S15 L252 I256 M324 G327 Y330 H331 K334 S6 L230 I234 M302 G305 Y308 H309 K312
BS11 CL7 41 N17 E21 W29 H33 H148 L251 L252 A255 L259 N8 E12 W20 H24 H133 L229 L230 A233 L237
BS12 CL7 41 Q36 I40 Q27 I31
BS13 CL7 41 N17 R19 L20 K28 A32 N8 R10 L11 K19 A23
BS14 CL7 41 H33 I34 I37 F131 F133 Y143 I144 H147 H148 L151 H24 I25 I28 F116 F118 Y128 I129 H132 H133 L136
BS15 CL7 41 V104 G108 H112 P117 T128 F131 V95 G99 H103 P108 T113 F116
BS16 CL7 41 Q130 F131 Y143 H147 Q115 F116 Y128 H132
BS17 CL7 41 V190 L191 G194 V168 L169 G172
BS18 CL7 41 Y323 Q326 L329 F340 Y301 Q304 L307 F318
BS19 CL7 41 F290 I292 A293 P294 Y318 F322 F268 I270 A271 P272 Y296 F300
BS20 CL7 41 W43 L46 N47 S50 W34 L37 N38 S41
BS21 CL7 41 W195 F196 W173 F174
BS22 ZEX 41 N315 Y323 N293 Y301
BS23 ZEX 41 C202 V205 I218 C180 V183 I196
Gene Ontology
Molecular Function
GO:0016168 chlorophyll binding
Biological Process
GO:0009767 photosynthetic electron transport chain
GO:0015979 photosynthesis
GO:0019684 photosynthesis, light reaction
Cellular Component
GO:0009521 photosystem
GO:0016020 membrane
GO:0031676 plasma membrane-derived thylakoid membrane

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:7ymm, PDBe:7ymm, PDBj:7ymm
PDBsum7ymm
PubMed38394197
UniProtB0C576

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