Structure of PDB 8bd3 Chain 4

Receptor sequence
>8bd34 (length=222) Species: 2649997 (Chlorella ohadii) [Search protein sequence]
EFYGPDRAKWLGPFSEGSVPSYLKGEFPGDYGWDTAGLSADPETFARYRE
IEVIHARWAMLGALGCLTPELLQNNGAADFGEAAVWFKAGASIFNEDGLN
YLGNPSLIHAQSIVAVLLTQLVIMGAAEAYRYSGEGPVETSGDSLYPGGF
FDPLGLADDPDTLAELKVKEIKNGRLAMFSMFGFFVQGLVTGKSPLENLA
DHLAEPSVNNGFASATKFLPLP
3D structure
PDB8bd3 Structure of Chlorella ohadii Photosystem II Reveals Protective Mechanisms against Environmental Stress.
Chain4
Resolution2.73 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 CHL 4 K48 W49 L50 G51 Y70 W72 F251 K9 W10 L11 G12 Y31 W33 F212
BS02 CLA 4 L62 G68 D69 Y70 G71 W72 D73 L77 S78 F84 Y87 R88 E91 R214 M217 L23 G29 D30 Y31 G32 W33 D34 L38 S39 F45 Y48 R49 E52 R175 M178
BS03 CLA 4 I90 H94 F224 I51 H55 F185
BS04 CLA 4 L100 G101 G104 F119 A122 L138 I147 L61 G62 G65 F80 A83 L99 I108
BS05 CHL 4 S145 L146 I147 H148 A149 Q150 S151 V155 S106 L107 I108 H109 A110 Q111 S112 V116
BS06 CHL 4 G129 I132 L138 V155 T158 Q159 I162 M163 G90 I93 L99 V116 T119 Q120 I123 M124
BS07 CHL 4 F126 G129 A130 F133 L156 F87 G90 A91 F94 L117
BS08 CHL 4 I93 R96 W97 Y169 R170 G173 E174 P176 V177 S183 L184 P186 F190 I54 R57 W58 Y130 R131 G134 E135 P137 V138 S144 L145 P147 F151
BS09 CHL 4 E89 I90 I93 H94 W97 Q159 L160 M163 G164 E167 Y171 E50 I51 I54 H55 W58 Q120 L121 M124 G125 E128 Y132
BS10 CLA 4 R96 M99 L100 Y185 P186 G187 F190 D191 L195 L202 L205 K206 E209 R57 M60 L61 Y146 P147 G148 F151 D152 L156 L163 L166 K167 E170
BS11 CLA 4 K208 K211 N212 L215 K169 K172 N173 L176
BS12 CLA 4 L103 K208 N212 L215 L64 K169 N173 L176
BS13 CLA 4 F218 S219 F221 G222 V225 Q226 T230 N237 L238 H241 N249 G250 F179 S180 F182 G183 V186 Q187 T191 N198 L199 H202 N210 G211
BS14 CLA 4 L238 H241 L242 P245 F251 L199 H202 L203 P206 F212
BS15 RRX 4 M99 L103 F190 P192 L215 S219 F223 M60 L64 F151 P153 L176 S180 F184
BS16 CLA 4 W125 F126 L228 W86 F87 L189
BS17 CHL 4 F251 A254 T255 F257 L258 F212 A215 T216 F218 L219
Gene Ontology
Biological Process
GO:0009765 photosynthesis, light harvesting
Cellular Component
GO:0016020 membrane

View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:8bd3, PDBe:8bd3, PDBj:8bd3
PDBsum8bd3
PubMed37566050
UniProtA0A2P6TDA6

[Back to BioLiP]