Structure of PDB 4io9 Chain 4

Receptor sequence
>4io94 (length=37) Species: 1299 (Deinococcus radiodurans) [Search protein sequence]
MKVRSSVKKMCDNCKVVRRHGRVLVICSNVKHKQRQG
3D structure
PDB4io9 Novel 3-O-carbamoyl erythromycin A derivatives (carbamolides) with activity against resistant staphylococcal and streptococcal isolates.
Chain4
Resolution3.2 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 rna 4 M1 K2 V3 R4 S5 S6 V7 K8 K9 M10 K15 V17 R18 R19 G21 R22 V30 K31 R35 Q36 G37 M1 K2 V3 R4 S5 S6 V7 K8 K9 M10 K15 V17 R18 R19 G21 R22 V30 K31 R35 Q36 G37
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
GO:0019843 rRNA binding
GO:0046872 metal ion binding
Biological Process
GO:0006412 translation
Cellular Component
GO:0005737 cytoplasm
GO:0005840 ribosome
GO:1990904 ribonucleoprotein complex

View graph for
Molecular Function

View graph for
Biological Process

View graph for
Cellular Component
External links
PDB RCSB:4io9, PDBe:4io9, PDBj:4io9
PDBsum4io9
PubMed23414806
UniProtQ9RSK0|RL36_DEIRA Large ribosomal subunit protein bL36 (Gene Name=rpmJ)

[Back to BioLiP]