Structure of PDB 3pip Chain 4

Receptor sequence
>3pip4 (length=37) Species: 1299 (Deinococcus radiodurans) [Search protein sequence]
MKVRSSVKKMCDNCKVVRRHGRVLVICSNVKHKQRQG
3D structure
PDB3pip Crystal structure of the synergistic antibiotic pair, lankamycin and lankacidin, in complex with the large ribosomal subunit.
Chain4
Resolution3.45 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna 4 M1 K2 V3 R4 S5 S6 V7 K8 K9 M10 R18 R19 V30 K31 R35 Q36 M1 K2 V3 R4 S5 S6 V7 K8 K9 M10 R18 R19 V30 K31 R35 Q36
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
GO:0019843 rRNA binding
GO:0046872 metal ion binding
Biological Process
GO:0006412 translation
Cellular Component
GO:0005737 cytoplasm
GO:0005840 ribosome
GO:1990904 ribonucleoprotein complex

View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:3pip, PDBe:3pip, PDBj:3pip
PDBsum3pip
PubMed21282615
UniProtQ9RSK0|RL36_DEIRA Large ribosomal subunit protein bL36 (Gene Name=rpmJ)

[Back to BioLiP]