Structure of PDB 5u9f Chain 34
Receptor sequence
>5u9f34 (length=38) Species:
562
(Escherichia coli) [
Search protein sequence
]
MKVRASVKKLCRNCKIVKRDGVIRVICSAEPKHKQRQG
3D structure
PDB
5u9f
Mechanism of ribosome rescue by ArfA and RF2.
Chain
34
Resolution
3.2 Å
3D
structure
[
Spin on
]
[
Spin off
]
[
Reset orientation
]
[
High quality
]
[
Low quality
]
[
White background
]
[
Black background
]
[
Download
]
[
Download structure with residue number starting from 1
]
Enzymatic activity
Enzyme Commision number
?
Interaction with ligand
Site
#
Ligand
Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01
rna
34
M1 V3 R4 A5 S6 K8 L10 R12 K18 R19 D20 G21 R24 P31 K32 K34 R36 G38
M1 V3 R4 A5 S6 K8 L10 R12 K18 R19 D20 G21 R24 P31 K32 K34 R36 G38
BS02
ZN
34
C11 C14 C27 H33
C11 C14 C27 H33
Gene Ontology
Molecular Function
GO:0003735
structural constituent of ribosome
Biological Process
GO:0002181
cytoplasmic translation
GO:0006412
translation
Cellular Component
GO:0005737
cytoplasm
GO:0005840
ribosome
GO:0022625
cytosolic large ribosomal subunit
GO:1990904
ribonucleoprotein complex
View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB
RCSB:5u9f
,
PDBe:5u9f
,
PDBj:5u9f
PDBsum
5u9f
PubMed
28300532
UniProt
P0A7Q6
|RL36_ECOLI Large ribosomal subunit protein bL36A (Gene Name=rpmJ)
[
Back to BioLiP
]