Structure of PDB 8rpz Chain 3

Receptor sequence
>8rpz3 (length=64) Species: 562 (Escherichia coli) [Search protein sequence]
PKIKTVRGAAKRFKKTGKGGFKHKHANLRHILTKKATKRKRHLRPKAMVS
KGDLGLVIACLPYA
3D structure
PDB8rpz Multimodal binding and inhibition of bacterial ribosomes by the antimicrobial peptides Api137 and Api88.
Chain3
Resolution2.44 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna 3 P1 K2 I3 K4 T5 R7 K11 R12 T16 K18 K22 H25 A26 N27 R29 H30 L32 T33 K34 T37 K38 R39 R41 H42 R44 K46 M48 S50 K51 Y63 P1 K2 I3 K4 T5 R7 K11 R12 T16 K18 K22 H25 A26 N27 R29 H30 L32 T33 K34 T37 K38 R39 R41 H42 R44 K46 M48 S50 K51 Y63
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
Biological Process
GO:0002181 cytoplasmic translation
GO:0006412 translation
Cellular Component
GO:0005737 cytoplasm
GO:0005840 ribosome
GO:0022625 cytosolic large ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Cellular Component
External links
PDB RCSB:8rpz, PDBe:8rpz, PDBj:8rpz
PDBsum8rpz
PubMed38730238
UniProtP0A7Q1|RL35_ECOLI Large ribosomal subunit protein bL35 (Gene Name=rpmI)

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