Structure of PDB 8r8m Chain 3

Receptor sequence
>8r8m3 (length=38) Species: 679895 (Escherichia coli BW25113) [Search protein sequence]
MKVRASVKKLCRNCKIVKRDGVIRVICSAEPKHKQRQG
3D structure
PDB8r8m Paenilamicins from the honey bee pathogen Paenibacillus larvae are context-specific translocation inhibitors of protein synthesis.
Chain3
Resolution2.4 Å
3D
structure
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Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna 3 M1 K2 R4 A5 S6 V7 K8 L10 V17 R19 D20 R24 K32 K34 R36 Q37 G38 M1 K2 R4 A5 S6 V7 K8 L10 V17 R19 D20 R24 K32 K34 R36 Q37 G38
BS02 ZN 3 C11 C27 H33 C11 C27 H33
Gene Ontology
Biological Process
GO:0002181 cytoplasmic translation
GO:0006412 translation
Cellular Component
GO:0005737 cytoplasm
GO:0005840 ribosome
GO:0022625 cytosolic large ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Biological Process
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Cellular Component
External links
PDB RCSB:8r8m, PDBe:8r8m, PDBj:8r8m
PDBsum8r8m
PubMed38826346
UniProtP0A7Q6|RL36_ECOLI Large ribosomal subunit protein bL36A (Gene Name=rpmJ)

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