Structure of PDB 8om4 Chain 3

Receptor sequence
>8om43 (length=257) Species: 4932 (Saccharomyces cerevisiae) [Search protein sequence]
IHVVPKLPNSKALLQNGVPNILSSSGFKTVWFDYQRYLCDKLTLATAGQS
LESYYPFHILLKTAGNPLQSNIFNLASSIHNNHLFVENILPSAVEHGTNS
NAVVKTEPSRLFLSKIKDSFNGSDWEVVKEEMIYRAENEVLGQGWLFLVE
NNEKKLFILTSNNNGTPYYFPRNQSFDLNSAISIDEFATLKQMKELIGKS
TKLNGKVQDWTMPIICVNLWDHAYLHDYGVGNRSKYVKNVLDNLNWSVVN
NRIFSGI
3D structure
PDB8om4 METTL17 is an Fe-S cluster checkpoint for mitochondrial translation.
Chain3
Resolution2.32 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna 3 Y61 F64 H65 K69 N73 Q76 Y175 W217 M219 Y54 F57 H58 K62 N66 Q69 Y168 W210 M212
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
GO:0004784 superoxide dismutase activity
GO:0046872 metal ion binding
Biological Process
GO:0006801 superoxide metabolic process
GO:0019430 removal of superoxide radicals
GO:0032543 mitochondrial translation
Cellular Component
GO:0005737 cytoplasm
GO:0005739 mitochondrion
GO:0005743 mitochondrial inner membrane
GO:0005763 mitochondrial small ribosomal subunit
GO:0005840 ribosome
GO:1990904 ribonucleoprotein complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:8om4, PDBe:8om4, PDBj:8om4
PDBsum8om4
PubMed38199006
UniProtP47141|RT26_YEAST Small ribosomal subunit protein mS42 (Gene Name=RSM26)

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