Structure of PDB 8ine Chain 3

Receptor sequence
>8ine3 (length=230) Species: 9606 (Homo sapiens) [Search protein sequence]
LVPENLLKKRKAYQALKATQAKQALLAKKEQKKLRFKRLESFLHDSWRQK
RDKVRLRRLEVKPHLPDKHSLAFVVRIERIDGVSLLVQRTIARLRLKKIF
SGVFVKVTPQNLKMLRIVEPYVTWGFPNLKSVRELILKRGQAKVKNKTIP
LTDNTVIEEHLGKFGVICLEDLIHEIAFPGKHFQEISWFLCPFHLSVARH
ATKNRVGFLKEMGTPGYRGERINQLIRQLN
3D structure
PDB8ine Visualizing the nucleoplasmic maturation of human pre-60S ribosomal particles.
Chain3
Resolution3.2 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna 3 Q39 L44 K48 Q50 A223 R224 Q20 L25 K29 Q31 A198 R199
BS02 rna 3 R57 F58 R35 F36
BS03 rna 3 W69 R80 P85 W47 R58 P63
Gene Ontology
Molecular Function
GO:0003723 RNA binding
GO:0003735 structural constituent of ribosome
GO:0005515 protein binding
Biological Process
GO:0000463 maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0001825 blastocyst formation
Cellular Component
GO:0005730 nucleolus
GO:0005739 mitochondrion
GO:0005840 ribosome
GO:0022625 cytosolic large ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:8ine, PDBe:8ine, PDBj:8ine
PDBsum8ine
PubMed37491604
UniProtQ6DKI1|RL7L_HUMAN Ribosomal protein uL30-like (Gene Name=RPL7L1)

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