Structure of PDB 8cgd Chain 3

Receptor sequence
>8cgd3 (length=38) Species: 679895 (Escherichia coli BW25113) [Search protein sequence]
MKVRASVKKLCRNCKIVKRDGVIRVICSAEPKHKQRQG
3D structure
PDB8cgd Structural conservation of antibiotic interaction with ribosomes.
Chain3
Resolution1.98 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna 3 M1 K2 R4 A5 S6 V7 K8 K15 V17 K18 R19 D20 R24 P31 K32 K34 R36 Q37 G38 M1 K2 R4 A5 S6 V7 K8 K15 V17 K18 R19 D20 R24 P31 K32 K34 R36 Q37 G38
BS02 ZN 3 C11 C14 C27 H33 C11 C14 C27 H33
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
Biological Process
GO:0002181 cytoplasmic translation
GO:0006412 translation
Cellular Component
GO:0005737 cytoplasm
GO:0005840 ribosome
GO:0022625 cytosolic large ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Biological Process
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Cellular Component
External links
PDB RCSB:8cgd, PDBe:8cgd, PDBj:8cgd
PDBsum8cgd
PubMed37550453
UniProtP0A7Q6|RL36_ECOLI Large ribosomal subunit protein bL36A (Gene Name=rpmJ)

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