Structure of PDB 9b00 Chain 2s

Receptor sequence
>9b002s (length=83) Species: 300852 (Thermus thermophilus HB8) [Search protein sequence]
PRSLKKGVFVDDHLLEKVLELNAKGEKRLIKTWSRRSTIVPEMVGHTIAV
YNGKQHVPVYITENMVGHKLGEFAPTRTYRGHG
3D structure
PDB9b00 Berberine analog of chloramphenicol exhibits a distinct mode of action and unveils ribosome plasticity.
Chain2s
Resolution2.8 Å
3D
structure
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Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna 2s P2 R3 S4 L5 K6 K7 F10 H14 K18 W34 S35 R36 R37 Y52 N53 G54 K55 K70 G72 E73 R78 T79 Y80 H83 P1 R2 S3 L4 K5 K6 F9 H13 K17 W33 S34 R35 R36 Y51 N52 G53 K54 K69 G71 E72 R77 T78 Y79 H82
External links
PDB RCSB:9b00, PDBe:9b00, PDBj:9b00
PDBsum9b00
PubMed39019034
UniProtQ5SHP2|RS19_THET8 Small ribosomal subunit protein uS19 (Gene Name=rpsS)

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