Structure of PDB 6cfj Chain 2k

Receptor sequence
>6cfj2k (length=114) Species: 300852 (Thermus thermophilus HB8) [Search protein sequence]
QVASGRAYIHASYNNTIVTITDPDGNPITWSSGGVIGYKGSRKGTPYAAQ
LAALDAAKKAMAYGMQSVDVIVRGTGAGREQAIRALQASGLQVKSIVDDT
PVPHNGCRPKKKFR
3D structure
PDB6cfj Binding and Action of Amino Acid Analogs of Chloramphenicol upon the Bacterial Ribosome.
Chain2k
Resolution2.8 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna 2k Y20 H22 N26 N27 I29 T31 G37 N38 P39 W42 G46 G52 S53 K55 R85 P113 V114 P115 H116 N117 G118 C119 R120 K122 K123 Y8 H10 N14 N15 I17 T19 G25 N26 P27 W30 G34 G40 S41 K43 R73 P101 V102 P103 H104 N105 G106 C107 R108 K110 K111
BS02 rna 2k K51 R54 K39 R42
BS03 MG 2k N26 G52 N14 G40
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
GO:0019843 rRNA binding
Biological Process
GO:0006412 translation
Cellular Component
GO:0005840 ribosome
GO:0022627 cytosolic small ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:6cfj, PDBe:6cfj, PDBj:6cfj
PDBsum6cfj
PubMed29410130
UniProtP80376|RS11_THET8 Small ribosomal subunit protein uS11 (Gene Name=rpsK)

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