Structure of PDB 6n9e Chain 2j

Receptor sequence
>6n9e2j (length=96) Species: 274 (Thermus thermophilus) [Search protein sequence]
RIKLRGFDHKTLDASAQKIVEAARRSGAQVSGPIPLPTRVRRFTVIRGPF
KHKDSREHFELRTHNRLVDIINPNRKTIEQLMTLDLPTGVEIEIKT
3D structure
PDB6n9e Mechanistic insights into the slow peptide bond formation with D-amino acids in the ribosomal active site.
Chain2j
Resolution3.7 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna 2j K7 R9 H13 S35 G36 P37 I38 P39 L40 P41 T42 R43 V44 R45 R46 T48 R51 P53 F54 K55 H56 K57 S59 R60 H62 H68 R70 L71 K3 R5 H9 S31 G32 P33 I34 P35 L36 P37 T38 R39 V40 R41 R42 T44 R47 P49 F50 K51 H52 K53 S55 R56 H58 H64 R66 L67
Gene Ontology
Molecular Function
GO:0000049 tRNA binding
GO:0003723 RNA binding
GO:0003735 structural constituent of ribosome
GO:0019843 rRNA binding
Biological Process
GO:0006412 translation
Cellular Component
GO:0005840 ribosome
GO:0015935 small ribosomal subunit
GO:1990904 ribonucleoprotein complex

View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:6n9e, PDBe:6n9e, PDBj:6n9e
PDBsum6n9e
PubMed30520988
UniProtQ5SHN7|RS10_THET8 Small ribosomal subunit protein uS10 (Gene Name=rpsJ)

[Back to BioLiP]