Structure of PDB 8t8c Chain 2e

Receptor sequence

>8t8c2e (length=148) Species: 300852 (Thermus thermophilus HB8) [Search protein sequence]

DFEEKMILIRRTARMQAGGRRFRFGALVVVGDRQGRVGLGFGKAPEVPLA
VQKAGYYARRNMVEVPLQNGTIPHEIEVEFGASKIVLKPAAPGTGVIAGA
VPRAILELAGVTDILTKELGSRNPINIAYATMEALRQLRTKADVERLR

3D structure

PDB

8t8c Practical Synthesis of N -Formylmethionylated Peptidyl-tRNA Mimics.

Chain

Resolution

2.6 Å

3D
structure

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Enzymatic activity

Enzyme Commision number

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	rna	2e	R14 T16 A17 R18 M19 Q20 G22 R24 R25 K47 P49 K57 Y61 G85 A94 A95 T98 I101 A102 G103 R107 L119 T120 K121 E122 L123 S125 R126 N127 N130 Y133	R10 T12 A13 R14 M15 Q16 G18 R20 R21 K43 P45 K53 Y57 G81 A90 A91 T94 I97 A98 G99 R103 L115 T116 K117 E118 L119 S121 R122 N123 N126 Y129

Gene Ontology

	Molecular Function
GO:0003723	RNA binding
GO:0003735	structural constituent of ribosome
GO:0019843	rRNA binding

	Biological Process
GO:0006412	translation

	Cellular Component
GO:0005737	cytoplasm
GO:0005840	ribosome
GO:0015935	small ribosomal subunit
GO:1990904	ribonucleoprotein complex

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Molecular Function

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Biological Process

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Cellular Component

External links

PDB	RCSB:8t8c, PDBe:8t8c, PDBj:8t8c
PDBsum	8t8c
PubMed	37433044
UniProt	Q5SHQ5\|RS5_THET8 Small ribosomal subunit protein uS5 (Gene Name=rpsE)

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