Structure of PDB 6ip6 Chain 2X

Receptor sequence
>6ip62X (length=107) Species: 9606 (Homo sapiens) [Search protein sequence]
NEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRIDTR
LNKAVWAKGIRNVPYRIRVRLSRKRNEDEDSPNKLYTLVTYVPVTTFKNL
QTVNVDE
3D structure
PDB6ip6 HCV IRES Captures an Actively Translating 80S Ribosome.
Chain2X
Resolution4.5 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna 2X R23 T26 N28 H30 K31 R32 H34 G35 F38 R41 R44 L46 R63 I64 N69 I77 R78 N79 R83 N116 L117 Q118 T119 N121 R6 T9 N11 H13 K14 R15 H17 G18 F21 R24 R27 L29 R46 I47 N52 I60 R61 N62 R66 N99 L100 Q101 T102 N104
Gene Ontology
Molecular Function
GO:0003723 RNA binding
GO:0003735 structural constituent of ribosome
GO:0005515 protein binding
Biological Process
GO:0002181 cytoplasmic translation
GO:0006412 translation
Cellular Component
GO:0005737 cytoplasm
GO:0005829 cytosol
GO:0005840 ribosome
GO:0005925 focal adhesion
GO:0016020 membrane
GO:0022625 cytosolic large ribosomal subunit
GO:0022626 cytosolic ribosome
GO:0070062 extracellular exosome
GO:1990904 ribonucleoprotein complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:6ip6, PDBe:6ip6, PDBj:6ip6
PDBsum6ip6
PubMed31080011
UniProtP62899|RL31_HUMAN Large ribosomal subunit protein eL31 (Gene Name=RPL31)

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