Structure of PDB 5ibb Chain 2I

Receptor sequence
>5ibb2I (length=111) Species: 300852 (Thermus thermophilus HB8) [Search protein sequence]
SGRAYIHASYNNTIVTITDPDGNPITWSSGGVIGYKGSRKGTPYAAQLAA
LDAAKKAMAYGMQSVDVIVRGTGAGREQAIRALQASGLQVKSIVDDTPVP
HNGCRPKKKFR
3D structure
PDB5ibb The ribosome prohibits the GU wobble geometry at the first position of the codon-anticodon helix.
Chain2I
Resolution2.96 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna 2I Y20 H22 N26 N27 T31 G37 N38 P39 W42 S44 G46 G52 S53 K55 R85 V114 H116 N117 G118 C119 R120 K122 K123 K124 Y5 H7 N11 N12 T16 G22 N23 P24 W27 S29 G31 G37 S38 K40 R70 V99 H101 N102 G103 C104 R105 K107 K108 K109
BS02 MG 2I N26 G52 K55 N11 G37 K40
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
GO:0019843 rRNA binding
Biological Process
GO:0006412 translation
Cellular Component
GO:0005840 ribosome
GO:0022627 cytosolic small ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Molecular Function
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Cellular Component
External links
PDB RCSB:5ibb, PDBe:5ibb, PDBj:5ibb
PDBsum5ibb
PubMed27174928
UniProtP80376|RS11_THET8 Small ribosomal subunit protein uS11 (Gene Name=rpsK)

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