Structure of PDB 7ymm Chain 24

Receptor sequence
>7ymm24 (length=331) Species: 329726 (Acaryochloris marina MBIC11017) [Search protein sequence]
TSVLSNFENEWWAGNVRMTDLSGMLLGAHLCHAALMSVVPGAFIVQEVAR
YQPGVSLPDQGMIFMPHLAALGVGVGAGGEIVDTYPFFVIGVLHFFIAAV
CCAAGLFHTFRGETDLNDAPDDSYAAAFRYEWDDFESLSTIVGHHLVFIS
VACLIFAVNATYGTGMYDINTDTVHQISPNLNPITLIGYLFGFTPDGWSG
AGMAAVNNMEDVIGGHFLIGVIDLLGAAFHILYRKPTPLFTKHPVFSPAN
GGWSNVGMLNSELILSWSVASVGFMGISSSLFIRYCDVAYPPVFHGVDRT
GAATLQLILGLVWMLGGGLWHGLRGERLYAA
3D structure
PDB7ymm Structure of a large photosystem II supercomplex from Acaryochloris marina.
Chain24
Resolution3.6 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 CL7 24 F116 A119 A123 F96 A99 A103
BS02 ZEX 24 C51 L55 V58 F115 C122 C31 L35 V38 F95 C102
BS03 CL7 24 L91 A172 C173 H236 M295 F302 A309 Y310 L71 A152 C153 H216 M275 F282 A289 Y290
BS04 CL7 24 M295 G296 S299 I303 Y310 L329 W333 M275 G276 S279 I283 Y290 L309 W313
BS05 CL7 24 M56 P60 I64 F84 H114 M36 P40 I44 F64 H94
BS06 CL7 24 W287 A290 M334 L339 E346 W267 A270 M314 L319 E326
BS07 CL7 24 F155 V162 L166 I242 D243 G246 F249 H250 P256 T257 L259 F260 F135 V142 L146 I222 D223 G226 F229 H230 P236 T237 L239 F240
BS08 CL7 24 F155 L158 V162 H165 D243 I284 W287 S291 M295 F135 L138 V142 H145 D223 I264 W267 S271 M275
BS09 CL7 24 F27 N35 V36 L285 V289 W333 G337 W340 H341 R344 F7 N15 V16 L265 V269 W313 G317 W320 H321 R324
BS10 CL7 24 N35 M38 L45 H49 H52 M56 W152 L285 S288 N15 M18 L25 H29 H32 M36 W132 L265 S268
BS11 CL7 24 H52 L55 M56 V59 W333 H32 L35 M36 V39 W313
BS12 CL7 24 W31 G34 N35 R37 M38 M44 A48 W11 G14 N15 R17 M18 M24 A28
BS13 CL7 24 L46 H49 F148 Y150 I161 H164 H165 F168 L26 H29 F128 Y130 I141 H144 H145 F148
BS14 CL7 24 L46 V120 A124 F127 H128 Y144 A145 F148 L26 V100 A104 F107 H108 Y124 A125 F128
BS15 CL7 24 H164 I251 H144 I231
BS16 CL7 24 L210 F211 W218 G220 A221 G222 M223 F294 L190 F191 W198 G200 A201 G202 M203 F274
BS17 ZEX 24 R304 L327 R284 L307
BS18 ZEX 24 V232 G235 H236 I239 V212 G215 H216 I219
BS19 ZEX 24 F116 F148 F96 F128
Gene Ontology
Molecular Function
GO:0016168 chlorophyll binding
Biological Process
GO:0009767 photosynthetic electron transport chain
GO:0015979 photosynthesis
GO:0019684 photosynthesis, light reaction
Cellular Component
GO:0009521 photosystem
GO:0016020 membrane
GO:0031676 plasma membrane-derived thylakoid membrane

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:7ymm, PDBe:7ymm, PDBj:7ymm
PDBsum7ymm
PubMed38394197
UniProtB0C3E6

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