Structure of PDB 7vd5 Chain 20

Receptor sequence

>7vd520 (length=155) [Search protein sequence]

EPLGLYDPLGWLDPEKDPASKFATFHANFERRRAVERKHGRIAMVAVVGM
LFHNADIEFPGYLSGELGIRFSDVPNGMNGLFSIPLAGLTQIVFAIGVME
LAIWPASNYSGDYGTGYGRPFVPNVLEGDELKYKLDMEINQGRAAMMGIM
GALVG

3D structure

PDB

7vd5 Structural basis for different types of hetero-tetrameric light-harvesting complexes in a diatom PSII-FCPII supercomplex

Chain

Resolution

2.5 Å

3D
structure

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Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)
BS01	CLA	20	Y145 G146 P148 N152	Y117 G118 P120 N124
BS02	A86	20	L117 T118 V121 F122	L89 T90 V93 F94
BS03	CLA	20	L33 P36 W39 L40 F57 R60 R61 E64 H67 R171 M174	L5 P8 W11 L12 F29 R32 R33 E36 H39 R143 M146
BS04	KC1	20	H54 R59 R60 H67	H26 R31 R32 H39
BS05	CLA	20	V73 A74 G77 F80 H81 E86 F87 V102 G108 L109	V45 A46 G49 F52 H53 E58 F59 V74 G80 L81
BS06	KC1	20	L91 S92 G93 E94 P113 G116 Q119 I120	L63 S64 G65 E66 P85 G88 Q91 I92
BS07	KC1	20	V63 K66 H67 V121 I124 E128 L129 A134 Y137	V35 K38 H39 V93 I96 E100 L101 A106 Y109
BS08	CLA	20	R69 M72 G139 D140 Y141 T143 G144 Y145 V153 L159 K162 L163 E166 Q169	R41 M44 G111 D112 Y113 T115 G116 Y117 V125 L131 K134 L135 E138 Q141
BS09	CLA	20	K162 M165 Q169	K134 M137 Q141
BS10	CLA	20	F50 A51 T52 F53 H54	F22 A23 T24 F25 H26
BS11	A86	20	M72 V75 T143 Y145 Q169 A172 A173 G176 A180	M44 V47 T115 Y117 Q141 A144 A145 G148 A152
BS12	DD6	20	H67 I70 A71 A74 G105 M106 G108 L109 M174 M175 I177	H39 I42 A43 A46 G77 M78 G80 L81 M146 M147 I149
BS13	DD6	20	K66 R69 I70 Y90 I120 I124	K38 R41 I42 Y62 I92 I96

External links

PDB	RCSB:7vd5, PDBe:7vd5, PDBj:7vd5
PDBsum	7vd5
PubMed

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