Structure of PDB 8uqm Chain 2

Receptor sequence

>8uqm2 (length=94) Species: 562 (Escherichia coli) [Search protein sequence]

MIREERLLKVLRAPHVSEKASTAMEKSNTIVLKVAKDATKAEIKAAVQKL
FEVEVEVVNTLVVKGKVKRHGQRIGRRSDWKKAYVTLKEGQNLD

3D structure

PDB

8uqm Escherichia coli transcription-translation coupled complex class A (TTC-A) containing RfaH bound to ops signal, mRNA with a 21 nt long spacer, and fMet-tRNAs in E-site and P-site of the ribosome

Chain

Resolution

5.3 Å

3D
structure

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Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	rna	2	M1 K9 H15 S17 E18 K19 T39 K40 N59 T60 L61 V62 K64 K66 R69 R73 G75 R76 R77 S78 K81 K82 Y84	M1 K9 H15 S17 E18 K19 T39 K40 N59 T60 L61 V62 K64 K66 R69 R73 G75 R76 R77 S78 K81 K82 Y84

External links

PDB	RCSB:8uqm, PDBe:8uqm, PDBj:8uqm
PDBsum	8uqm
PubMed	39117885

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