Structure of PDB 8p8n Chain 2

Receptor sequence
>8p8n2 (length=50) Species: 10090 (Mus musculus) [Search protein sequence]
SSHKTFRIKRFLAKKQKQNRPIPQWIRMKTGNKIRYNSKRRHWRRTKLGL
3D structure
PDB8p8n Real-space refinement in PHENIX for cryo-EM and crystallography.
Chain2
Resolution2.15 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna 2 S2 S3 H4 K5 K10 L13 Q17 I35 Y37 S39 R41 R42 H43 W44 R45 K48 L49 L51 S1 S2 H3 K4 K9 L12 Q16 I34 Y36 S38 R40 R41 H42 W43 R44 K47 L48 L50
BS02 rna 2 F7 R8 K15 K18 Q19 R21 I23 W26 M29 K30 T31 K40 F6 R7 K14 K17 Q18 R20 I22 W25 M28 K29 T30 K39
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
GO:0005515 protein binding
Biological Process
GO:0002181 cytoplasmic translation
Cellular Component
GO:0005737 cytoplasm
GO:0005829 cytosol
GO:0005840 ribosome
GO:0022625 cytosolic large ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Biological Process
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Cellular Component
External links
PDB RCSB:8p8n, PDBe:8p8n, PDBj:8p8n
PDBsum8p8n
PubMed
UniProtP62892|RL39_MOUSE Large ribosomal subunit protein eL39 (Gene Name=Rpl39)

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