Structure of PDB 7z13 Chain 2

Receptor sequence
>7z132 (length=660) Species: 4932 (Saccharomyces cerevisiae) [Search protein sequence]
ELTLESLSNVKANSYSEWITQPNVSRTIARELKSFLLEYTDETGRSVYGA
RIRTLGEMNSESLEVNYRHLAESKAILALFLAKCPEEMLKIFDLVAMEAT
ELHYPDYARIHSEIHVRISDFPTIYSLRELRESNLSSLVRVTGVVTRRTG
VFPQLKYVKFNCLKCGSILGPFFQDSNEEIRISFCTNCKSKGPFRVNGEK
TVYRNYQRVTLQEAPGTVPPGRLPRHREVILLADLVDVSKPGEEVEVTGI
YKNNYDGNLNAKNGFPVFATIIEANSIKRREGNTANEGEEGLDVFSWTEE
EEREFRKISRDRGIIDKIISSMAPSIYGHRDIKTAVACSLFGGVPKNVNG
KHSIRGDINVLLLGDPGTAKSQILKYVEKTAHRAVFATGQGASAVGLTAS
VRKDPITKEWTLEGGALVLADKGVCLIDEFDKMNDQDRTSIHEAMEQQSI
SISKAGIVTTLQARCSIIAAANPNGGRYNSTLPLAQNVSLTEPILSRFDI
LCVVRDLVDEEADERLATFVVDSHVRSHPELNARQRRLQRQRKKEEEISP
IPQELLMKYIHYARTKIYPKLHQMDMDKVSRVYADLRRESISTGSFPITV
RHLESILRIAESFAKMRLSEFVSSYDLDRAIKVVVDSFVDAQKVSVRRQL
RRSFAIYTLG
3D structure
PDB7z13 Mechanism of replication origin melting nucleated by CMG helicase assembly.
Chain2
Resolution3.4 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 3.6.4.12: DNA helicase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 dna 2 K633 A634 K454 A455
BS02 ATP 2 Y506 P545 G546 T547 A548 K549 S550 Q551 Y327 P366 G367 T368 A369 K370 S371 Q372
BS03 ZN 2 C341 C367 C162 C188
BS04 ATP 2 E625 R676 R808 E811 E446 R497 R601 E604
Gene Ontology
--> -->
 
 
UnboundLocalError		Python 3.6.8: /usr/bin/python3
Tue Dec 3 01:16:23 2024

A problem occurred in a Python script. Here is the sequence of function calls leading up to the error, in the order they occurred.

 /var/www/html/BioLiP/pdb.cgi in <module>()
   1443                 pubmed=display_regular_ligand(pdbid,asym_id,lig3,ligIdx,title)
   1444         else:
=> 1445             pubmed,uniprot=display_protein_receptor(pdbid,asym_id,title)
   1446     
   1447     uniprot_line=''
pubmed = '', uniprot = '', display_protein_receptor = <function display_protein_receptor>, pdbid = '7z13', asym_id = '2', title = 'Mechanism of replication origin melting nucleated by CMG helicase assembly.'
 /var/www/html/BioLiP/pdb.cgi in display_protein_receptor(pdbid='7z13', asym_id='2', title='Mechanism of replication origin melting nucleated by CMG helicase assembly.')
    839 
    840     if go:
=>  841         display_go(go,uniprot,pdbid,asym_id)
    842     return pubmed,uniprot
    843 
global display_go = <function display_go>, go = '0003677,0005524,0005634,0006260,0006270,0032508,0042555,1905775', uniprot = '', pdbid = '7z13', asym_id = '2'
 /var/www/html/BioLiP/pdb.cgi in display_go(go='0003677,0005524,0005634,0006260,0006270,0032508,0042555,1905775', uniprot='', pdbid='7z13', asym_id='2')
    480         '''.replace("$namespace_link",namespace_link
    481           ).replace("$namespace",namespace
=>  482           ).replace("$uniprot",u
    483         ))
    484         for l,(term,name) in enumerate(go2aspect[Aspect]):
u undefined

UnboundLocalError: local variable 'u' referenced before assignment
      args = ("local variable 'u' referenced before assignment",)
      with_traceback = <built-in method with_traceback of UnboundLocalError object>