Structure of PDB 7dz7 Chain 2

Receptor sequence

>7dz72 (length=217) Species: 3055 (Chlamydomonas reinhardtii) [Search protein sequence]

RPMWYPGATAPAHLDGSMLGDYGFDPLRLGVNKDNLKWFREAELTNGRWA
MAAVVGILFTDAVGLPKFWTAGAEKYALDNQTLALIEVAVFAVLEGKRYE
IYKKTGETGFLSFAPFDPMGMKSEEMKLKELKNGRLAMLAFLGFCSQAAV
YGKGPIETLQLHLADPGHNNIYTSSVGPETAVTVAVLCVLPMIIEATKTL
NPGKESVPYFPWNEPWN

3D structure

PDB

7dz7 Structural basis of LhcbM5-mediated state transitions in green algae.

Chain

Resolution

2.84 Å

3D
structure

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Enzymatic activity

Enzyme Commision number

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	CLA	2	A119 G123	A92 G96
BS02	CLA	2	M30 W31 P33 Y49 F51 L214 C215 P218	M3 W4 P6 Y22 F24 L187 C188 P191
BS03	CLA	2	G47 D48 Y49 F51 L56 G57 L63 F66 R67 E70 N73 R162 M165 L166 L169	G20 D21 Y22 F24 L29 G30 L36 F39 R40 E43 N46 R135 M138 L139 L142
BS04	CLA	2	W65 F66 N73	W38 F39 N46
BS05	CLA	2	A79 A80 G83 F86 T87 L92 Y103	A52 A53 G56 F59 T60 L65 Y76
BS06	CLA	2	W76 G99 Y103 L110 I113 E114 F118	W49 G72 Y76 L83 I86 E87 F91
BS07	CLA	2	W96 G99 N107 E114	W69 G72 N80 E87
BS08	CLA	2	W65 A69 T72 N73 W76 F118 E122 R125	W38 A42 T45 N46 W49 F91 E95 R98
BS09	CLA	2	R75 M78 T135 P142 F143 D144 M148 K149 M153 K154 E157 N160	R48 M51 T108 P115 F116 D117 M121 K122 M126 K127 E130 N133
BS10	CLA	2	L155 K156 K159 N160	L128 K129 K132 N133
BS11	CLA	2	K156 N160 L163	K129 N133 L136
BS12	CLA	2	G170 S173 Q174 Y178 T185 L186 H189 N196 N197 I198	G143 S146 Q147 Y151 T158 L159 H162 N169 N170 I171
BS13	CLA	2	H189 L190 P193	H162 L163 P166
BS14	CLA	2	S173 V203	S146 V176

Gene Ontology

	Molecular Function
GO:0016168	chlorophyll binding

	Biological Process
GO:0009416	response to light stimulus
GO:0009765	photosynthesis, light harvesting
GO:0009768	photosynthesis, light harvesting in photosystem I
GO:0015979	photosynthesis

	Cellular Component
GO:0009507	chloroplast
GO:0009522	photosystem I
GO:0009523	photosystem II
GO:0009535	chloroplast thylakoid membrane
GO:0009579	thylakoid
GO:0016020	membrane

View graph for
Molecular Function

View graph for
Biological Process

View graph for
Cellular Component

External links

PDB	RCSB:7dz7, PDBe:7dz7, PDBj:7dz7
PDBsum	7dz7
PubMed	34239095
UniProt	A8IKC8

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